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Publications - 2015 to Present


Kucukural A, Yukselen O, Ozata DM, Moore MJ and Garber M* (2019) DEBrowser: interactive differential expression analysis and visualization tool for count data. BMC Genomics, January 5; 20(1): 6; PMID: 306111200; PMCID: PMC6321710


Turanov AA, Lo A, Hassler MR, Makris A, Ashar-Patel A, Alterman JF, Coles AH, Haraszti RA, Roux L, Godinho BMDC, Echeverria D, Pears S, Iliopoulos J, Shanmugalingam R, Ogle R, Zsengeller ZK, Hennessy A, Karumanchi SA, Moore MJ* and Khvorova A* (2018) RNAi modulation of placental sFLT1 for the treatment of preeclampsia. Nature Biotechnology, November 19; PMID: 30451990

Metkar M, Ozadam H, Lajoie BR, Imakaev M, Mirny LA, Dekker J* and Moore MJ* (2018) Higher-Order Organization Principles of Pre-translational mRNPs. Molecular Cell, November 15; 72(4): 715-726. PMID: 30415953; PMCID: PMC6239896

Jain R, Frederick JP, Huang EY, Burke KE, Mauger DM, Andrianova EA, Farlow SJ, Siddiqui S, Pimentel J, Cheung-Ong K, McKinney KM, Köhrer C, Moore MJ and Chakraborty T*  (2018) MicroRNAs Enable mRNA Therapeutics to Selectively Program Cancer Cells to Self-Destruct. Nucleic Acid Ther., October; 28(5): 285-296. PMID: 30088967; PMCID: PMC6157376

Braun JE, Friedman L, Gelles J* and Moore MJ* (2018) Synergistic assembly of human pre-spliceosomes across introns and exons. eLife, June 22; 7. PMID: 29932423; PMCID: PMC6035042

Noma A, Smith CS, Huisman M, Martin RM, Moore MJ, and Grunwald D*. (2018) Advanced 3D analysis and optimization of single molecule FISH in Drosophila muscle. Small Methods, May 27;

Chen W, Moore J, Ozadam H, Shula HP, Rhind N, Weng Z and Moore MJ*.  (2018) Transcriptome-wide interrogation of the functional intronome using spliceosome profiling.  Cell, May 3; 173(4): 1031-1044; PMID: .29727662; PMCID: PMC6090549


Limoncelli KA, Merrikh CN and Moore MJ* (2017) ASC1 and RPS3: New actors in 18S non-functional rRNA decay. RNA, September 27; Epub. PMID: 28956756

Ashar-Patel A, Kaymaz Y, Rajakumar A, Bailey JA, Karumanchi SA and Moore MJ* (2017) FLT1 and transcriptome-wide polyadenylation site (PAS) analysis in preeclampsia. Scientific Reports, September 22; 7(1): 12139. PMID: 28939845

Mou H, Smith JL, Peng L, Yin H, Moore J, Zhang XO, Song CQ, Sheel A, Wu Q, Ozata DM, Li Y, Anderson DG, Emerson CP, Sontheimer EJ, Moore MJ, Weng Z and Xue W*. (2017) CRISPR/Cas9-mediated genome editing induces exon skipping by alternative splicing or exon deletion. Genome Biology, June 14; 18(1): 108. PMID: 28615073; PMCID: PMC5470253


Cenik C, Chua HN, Singh G, Akef A, Snyder MP, Palazzo AF, Moore MJ* and Roth FP*. (2017) A common class of transcripts with 5’-intron depletion, distinct early coding sequence features, and N1-methyladenosine modification. RNA, 23:270-283; Epub, December 19, 2016;  PMID: 27994090

Atianand MK, Hu W, Satpathy AT, Shen Y, Ricci EP, Alvarez-Dominguez JR, Bhatta A, Schattgen SA, McGowan JD, Bin J, Braun JE, Gandhi P, Moore MJ, Change HY, Lodish, HF, Caffrey DR, Fitzgerald KA*. (2016) A Long Noncoding RNA lincRNA-EPS Acts as a Transcriptional Brake to Restrain Inflammation. Cell, 165(7): 1672-85. PMID: 27315481

Hoskins AA*, Rodgers ML, Friedman LJ, Gelles J and Moore MJ (2016) Single molecule analysis reveals reversible and irreversible steps during spliceosome activation. eLife, 2016;5:e14166. PMID: 27244240.

Moore MJ* and Serebrov V (2016) Chapter 4: Single molecule approaches in RNA-protein interactions. RNA Processing: Disease and Genome-wide Probing, Springer, Editor: Gene Yeo. Adv Exp Med Biol, 907: 89-106. PMID: 27256383.

Heyer E and Moore MJ* (2016) Redefining the translational status of 80S monosomes. Cell, 164(4): 757-769. PMID: 26871635.

Sharma U, Conine CC, Shea JM, Boskovic A, Derr AG, Bing XY, Belleannee C, Kuckukural A, Serra RW, Sun F, Song L, Carone BR, Ricci EP, Li XZ, Fauquier L, Moore MJ, Sullivan R, Mello CC, Garber M and Rando OJ* (2016) Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals. Science, 351(6271): 391-396. PMID: 26721685.


Salomon WE, Jolly SM, Moore MJ, Zamore PD* and Serebrov V*. (2015) Single-Molecule Imaging Reveals that Argonaute Reshapes the Binding Properties of Its Nucleic Acid Guides. Cell, July 2; 162(1): 84-95. MCID: 26140592; PMCID: PMC4503223.

Roy CK, Olson S, Graveley BR, Zamore P* and Moore MJ*. (2015) Assessing long-distance RNA sequence connectivity via RNA-templated DNA-DNA ligationeLife, April 13; 4, doi: 10.7554/eLife.03700. PMID: 25866926; PMCID: PMC4442144.

Singh G, Pratt G, Yeo GW and Moore MJ*. (2015) The clothes make the mRNA: Past and present trends in mRNP fashionAnnual Review of Biochemistry, March, doi: 10.1146/annurev-biochem-080111-092106. PMID: 25784054; PMCID: PMC4804868.

Moore MJ. (2015) Twenty years of technologyRNA, March, 21:697-698. PMID: 25780196; PMCID: PMC4371338.

Chen W and Moore MJ*. (2015) Quick guide: Spliceosomes. Current Biology, Mar 2;25(5):R181-3. doi: 10.1016/j.cub.2014.11.059. PMID: 25734262.

*corresponding author(s)