Technical Bulletins and FAQ Lists

ChIP-SEQ Technical Note  (get it)
Small RNA Library FAQs  (get it)
DNA Library FAQs  (get it)

Analytical Tools & BioInformatics

BioTools: UNIX tutorial, primer design, and essential tools

The WIKI and NextGen Sequencing User Guides

GMOD: Generic Model Organism Database
Open source software which includes

Solexa Data Analysis, presentation by Dr. David Lapointe 20 Mar 2008get it )

Short-Read Sequence Alignment Software List


Other Things and Stuff

Gene Expression Omnibus at NIH