2004

H Shen and MR Green  (2004) A pathway of sequential arginine-serine-rich domain-splicing signal interactions during mammalian spliceosome assembly. Mol. Cell 16: 363-373.

JR Allen, LX Nguyen, KE Sargent, KL Lipson, A Hackett and F Urano (2004) High ER stress in beta-cells stimulates intracellular degradation of misfolded insulin. Biochem. Biophys. Res. Commun. 324: 166-170.

B Mollé, S Père, V Failli, I Bach and S Rétaux (2004). Lhx9 and Lhx9alpha: Differential biochemical properties and effects on neuronal differentiation. DNA Cell Biol. 11: 761-768.

V Boyartchuk , M Rojas, BS Yan, O Jobe, N Hurt, DM Dorfman, DE Higgins, WF Dietrich and I Kramnik (2004) The host resistance locus sst1 controls innate immunity to Listeria monocytogenes infection in immunodeficient mice. J. Immunol. 173: 5112-5120.

D Dupuy, QR Li, B Deplancke, M Boxem, T Hao, P Lamesch, R Sequerra, S Bosak, L Doucettte-Stamm, IA Hope, DE Hill, AJ Walhout  and M Vidal (2004) A first version of the Caenorhabditis elegans promoterome. Genome Res. 14: 2169-2175.

B Deplancke, D Dupuy, M Vidal and AJ Walhout  (2004) A Gateway-compatible yeast one-hybrid system. Genome Res. 14: 2093-2101.

YX Wang , CL Zhang, RT Yu, HK Cho, MC Nelson, CR Bayuga-Ocampo, J Ham, H Kang and RM Evans (2004) Regulation of muscle fiber type and running endurance by PPAR delta. PLoS Biol. 2: 1532-1539 (e294).

N Kleckner, D Zickler, GH Jones, J Dekker , R Padmore, J Henle and J Hutchinson (2004). A mechanical basis for chromosome function. Proc. Natl. Acad. Sci. USA, 101: 12592-15297.

JG Teodoro, DW Heilman, AE Parker and MR Green  (2004) The viral protein Apoptin associates with the anaphase-promoting complex to induce G2/M arrest and apoptosis in the absence of p53. Genes Dev. 18: 1952-1957.

T Yoneda, C Benedetti, F Urano , SG Clark, HP Harding and D Ron (2004) Compartment-specific perturbation of protein handling activates genes encoding mitochondrial chaperones. Cell Sci. 117: 4055-4066.

SR Oikemus, N McGinnis, J Queiroz-Machado, H Tukachinsky, S Takada, CE Sunkel and  MH Brodsky  (2004) Drosophila atm/telomere fusion is required for telomeric localization of HP1 and telomere position effect. Genes Dev. 15: 1850-1861.

JD Han, N Bertin, T Hao, DS Goldberg, GF Berriz, LV Zhang, D Dupuy, AJ Walhout , ME Cusick, FP Roth and M Vidal (2004) Evidence for dynamically organized modularity in the yeast protein-protein interaction network. Nature 430: 88-93.

C. Kielkopf, S Lucke and MR Green (2004) U2AF homology motifs: protein recognition in the RRM world. Genes Dev. 18: 1513-1526.

R Fisk Green, M Lorson, AJ Walhout , M Vidal and S van den Heuvel (2004) Identification of critical domains and putative partners for the Caenorhabditis elegans spindle component LIN-5. Mol. Genet Genomics 271: 532-544.

D Gabellini, MR Green  and R Tupler (2004) When enough is enough: genetic diseases associated with transcriptional derepression. Curr. Opin. Genet. Dev. 14: 301-307.

F Urano (2004) Stress signaling from the endoplasmic reticulum. Protein, Nucleic acids, and Enzyme, 49: 1002-1005.

H Shen, JL Kan, C Ghigna, G Biamonti and MR Green  (2004) A single polypyrimidine tract binding protein (PTB) binding site mediates splicing inhibition at mouse IgM exons M1 and M2. RNA 10: 787-794.

LH Castilla , P Perrat, NJ Martinez, SF Landrette, R Keys, S Oikemus, J Flanegan, S Heilman, L Garrett, A Dutra, S Anderson, GA Pihan, L Wolff and PP Liu (2004) Identification of genes that synergize with Cbfb-MYH11 in the pathogenesis of acute myeloid leukemia. Proc. Natl. Acad. Sci. USA 101: 4924-4929.

RM Evans, GD Barish and Y-X Wang (2004) PPARs and the complex journey to obesity. Nat Med. 10: 355-361.

N Gheldof and J Dekker (2004) Spatial organization of genomes. Curr. Genomics 5: 157-168.

U Acharya , MB Mowen, K Nagashima and JK Acharya (2004) Ceramidase expression facilitates membrane turnover and endocytosis of rhodopsin in photoreceptors. Proc Natl Acad Sci USA 101: 1922-1926.

H Shen, JL Kan and MR Green (2004) Arginine-serine-rich domains bound at splicing enhancers contact the branchpoint to promote spliceosome assembly. Mol. Cell 13: 367-376.

SR Bhaumik, T Raha, DP Aiello and MR Green (2004) In vivo target of a transcriptional activator revealed by fluorescence resonance energy transfer. Genes Dev. 18: 333-343.

MH Brodsky , BT Weinert, G Tsang, YS Rong, NM McGinnis, KG Golic, DC Rio and GM Rubin (2004) Drosophila melanogaster MNK/CHK2 and p53 regulate multiple DNA repair and apoptotic pathways following DNA damage. Mol. Cell. Biol. 24: 1219-1231.

SP Persengiev, X Zhu and MR Green (2004) Nonspecific, concentration-dependent stimulation and repression of mammalian gene expression by small interfering RNAs (siRNAs). RNA 10: 12-18.

AA Franco and PD Kaufman  (2004) Histone deposition proteins: links between the DNA replication machinery and epigenetic gene silencing. Cold Spring Harbor Symposia on Quantitative Biology 69: 1-8 (2004).