Section: Publications

Konstantin Zeldovich, Ph.D.

Academic Role: Assistant Professor

Faculty Appointment(s) In:
   Biochemistry and Molecular Pharmacology
   Program in Bioinformatics & Integrative Biology

SELECTED PUBLICATIONS

1. K.B. Zeldovich, E.I. Shakhnovich. Understanding protein evolution: From protein physics to Darwinian selection. Annual Review of Physical Chemistry, 59: 105-127 (2008)
2. K.B. Zeldovich, P. Chen, E.I. Shakhnovich. Protein stability imposes limits on organism complexity and speed of molecular evolution. Proc. Natl. Acad. Sci. USA, 104 (41): 16152-16157 (2007).
3. K.B. Zeldovich, P. Chen, B.E. Shakhnovich, E.I. Shakhnovich. A first-principle model of early evolution: Emergence of gene families, species and preferred protein folds. PLoS Computational Biology, 3 (7): e139 (2007).
4. S. Wallin, K.B. Zeldovich, E.I. Shakhnovich. The folding mechanics of a knotted protein. Journal of Molecular Biology 368 (3): 864-893 (2007).
5. I.N. Berezovsky, K.B. Zeldovich, E.I. Shakhnovich. Positive and negative design in stability and thermal adaptation of natural proteins, PLoS Computational Biology 3 (3): e52 (2007)
6. K.B. Zeldovich, I.N. Berezovsky, E.I. Shakhnovich. Protein and DNA sequence determinants of thermophilic adaptation, PLoS Computational Biology 3 (1): e5 (2007)
7. D.B. Lukatsky, K.B. Zeldovich, E.I. Shakhnovich. Statistically enhanced self-attraction of random patterns. Physical Review Letters 97 (17): 178101 (2006)
8. O. Campas, Y. Kafri, K.B. Zeldovich, J. Casademunt, J.-F. Joanny. Collective dynamics of interacting molecular motors. Physical Review Letters 97 (3): 038101 (2006)
9. K.B. Zeldovich, I.N. Berezovsky,  E.I. Shakhnovich, Physical origins of protein superfamilies. Journal of Molecular Biology 357 (4): 1335-1343 (2006)
10. K.B. Zeldovich, J.-F. Joanny,  J. Prost. Motor proteins transporting cargos. European Physical Journal E 17 (2): 155-163 (2005)
11. C. Leduc, O. Campas, K.B. Zeldovich, A. Roux, P. Jolimaitre, L. Bourel-Bonnet, B. Goud, J.-F. Joanny, P. Bassereau, J. Prost. Cooperative extraction of membrane nanotubes by molecular motors. Proc. Natl. Acad. Sci. USA 101 (49): 17096-17101 (2004)
12. K.B. Zeldovich, A.R. Khokhlov. Osmotically active and passive counterions in inhomogeneous polymer gels. Macromolecules 32 (10): 3488-3494 (1999)

Office: LRB 1004
Phone: 508-856-2354
Fax: 508-856-2392
E-mail: Konstantin.Zeldovich@umassmed.edu
Keywords: Biophysics, Protein Folding, Bioinformatics

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